Automated Protein Annotation Tool

INPUT DETAILS

Number of Residues:260

Sequence ID:sp|P17261|ERS1_YEAST Transmembrane protein ERS1 (ERD suppressor) - Saccharomyces cerevisiae (Baker's yeast).

Sequence:

MVSLDDILGIVYVTSWSISMYPPIITNWRHKSASAISMDFVMLNTAGYSYLVISIFLQLY
CWKMTGDESDLGRPKLTQFDFWYCLHGCLMNVVLLTQVVAGARIWRFPGKGHRKMNPWYL
RILLASLAIFSLLTVQFMYSNYWYDWHNSRTLAYCNNLFLLKISMSLIKYIPQVTHNSTR
KSMDCFPIQGVFLDVTGGIASLLQLIWQLSNDQGFSLDTFVTNFGKVGLSMVTLIFNFIF
IMQWFVYRSRGHDLASEYPL

Email address:s.v.v.deevi@rdg.ac.uk

Parameters:

	 Server : targetp 	 Parameter Name : origin 	 Value : non-plant

	 Server : psort 	 Parameter Name : origin 	 Value : yeast


Index of tools run:


Click on the name of the tool to avoid scrolling down.

NetPhos


NetOGlyc


PsiPred


DAS-TM filter


TargetP


PrositeScan


TMHMM


Plasmit


ChloroP


PSORT



Analysis results from program: NetPhos

Running NetPhos Version 2.0

Function : Protein Phosphorylation sites Prediction

NetPhos Web Server

Actual prediction(native, unparsed form)- available only for a limited time

ResidueMVSLDDILGIVYVTS
Number123456789101112131415
NetPhosP-score0.0000.0000.0330.0000.0000.0000.0000.0000.0000.0000.0000.0410.0000.0220.063

ResidueWSISMYPPIITNWRH
Number161718192021222324252627282930
NetPhosP-score0.0000.1480.0000.7990.0000.0150.0000.0000.0000.0000.0490.0000.0000.0000.000

ResidueKSASAISMDFVMLNT
Number313233343536373839404142434445
NetPhosP-score0.0000.2950.0000.9730.0000.0000.1260.0000.0000.0000.0000.0000.0000.0000.024

ResidueAGYSYLVISIFLQLY
Number464748495051525354555657585960
NetPhosP-score0.0000.0000.0810.0070.0610.0000.0000.0000.0120.0000.0000.0000.0000.0000.023

ResidueCWKMTGDESDLGRPK
Number616263646566676869707172737475
NetPhosP-score0.0000.0000.0000.0000.7170.0000.0000.0000.3450.0000.0000.0000.0000.0000.000

ResidueLTQFDFWYCLHGCLM
Number767778798081828384858687888990
NetPhosP-score0.0000.8660.0000.0000.0000.0000.0000.2820.0000.0000.0000.0000.0000.0000.000

ResidueNVVLLTQVVAGARIW
Number919293949596979899100101102103104105
NetPhosP-score0.0000.0000.0000.0000.0000.3300.0000.0000.0000.0000.0000.0000.0000.0000.000

ResidueRFPGKGHRKMNPWYL
Number106107108109110111112113114115116117118119120
NetPhosP-score0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.5130.000

ResidueRILLASLAIFSLLTV
Number121122123124125126127128129130131132133134135
NetPhosP-score0.0000.0000.0000.0000.0000.0050.0000.0000.0000.0000.0020.0000.0000.0050.000

ResidueQFMYSNYWYDWHNSR
Number136137138139140141142143144145146147148149150
NetPhosP-score0.0000.0000.0000.0480.0420.0000.0110.0000.5450.0000.0000.0000.0000.0070.000

ResidueTLAYCNNLFLLKISM
Number151152153154155156157158159160161162163164165
NetPhosP-score0.0060.0000.0000.6410.0000.0000.0000.0000.0000.0000.0000.0000.0000.0750.000

ResidueSLIKYIPQVTHNSTR
Number166167168169170171172173174175176177178179180
NetPhosP-score0.0500.0000.0000.0000.0400.0000.0000.0000.0000.2950.0000.0000.2160.0460.000

ResidueKSMDCFPIQGVFLDV
Number181182183184185186187188189190191192193194195
NetPhosP-score0.0000.9850.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000

ResidueTGGIASLLQLIWQLS
Number196197198199200201202203204205206207208209210
NetPhosP-score0.0130.0000.0000.0000.0000.0060.0000.0000.0000.0000.0000.0000.0000.0000.011

ResidueNDQGFSLDTFVTNFG
Number211212213214215216217218219220221222223224225
NetPhosP-score0.0000.0000.0000.0000.0000.0110.0000.0000.0340.0000.0000.1210.0000.0000.000

ResidueKVGLSMVTLIFNFIF
Number226227228229230231232233234235236237238239240
NetPhosP-score0.0000.0000.0000.0000.2050.0000.0000.0060.0000.0000.0000.0000.0000.0000.000

ResidueIMQWFVYRSRGHDLA
Number241242243244245246247248249250251252253254255
NetPhosP-score0.0000.0000.0000.0000.0000.0000.0500.0000.0130.0000.0000.0000.0000.0000.000

ResidueSEYPL
Number256257258259260
NetPhosP-score0.3000.0000.0170.0000.000

Threshold description :

P-scores greater than 0.5 are considered as positive predictions






Graphical Output :

annotation results graph






Analysis results from program: NetOGlyc

Running NetOGlyc Version 3.1

Function : Protein Glycosylation sites Prediction

NetOGlyc Web Server

Actual prediction(native, unparsed form)- available only for a limited time

ResidueMVSLDDILGIVYVTS
Number123456789101112131415
NetOGlycgscore0.0000.0000.3120.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.2560.174
iscore0.0000.0000.0550.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0700.051

ResidueWSISMYPPIITNWRH
Number161718192021222324252627282930
NetOGlycgscore0.0000.1790.0000.1850.0000.0000.0000.0000.0000.0000.3770.0000.0000.0000.000
iscore0.0000.0500.0000.0290.0000.0000.0000.0000.0000.0000.0770.0000.0000.0000.000

ResidueKSASAISMDFVMLNT
Number313233343536373839404142434445
NetOGlycgscore0.0000.2260.0000.2210.0000.0000.2040.0000.0000.0000.0000.0000.0000.0000.151
iscore0.0000.0270.0000.0260.0000.0000.0570.0000.0000.0000.0000.0000.0000.0000.052

ResidueAGYSYLVISIFLQLY
Number464748495051525354555657585960
NetOGlycgscore0.0000.0000.0000.0740.0000.0000.0000.0000.0830.0000.0000.0000.0000.0000.000
iscore0.0000.0000.0000.0510.0000.0000.0000.0000.0530.0000.0000.0000.0000.0000.000

ResidueCWKMTGDESDLGRPK
Number616263646566676869707172737475
NetOGlycgscore0.0000.0000.0000.0000.1660.0000.0000.0000.1100.0000.0000.0000.0000.0000.000
iscore0.0000.0000.0000.0000.0350.0000.0000.0000.0240.0000.0000.0000.0000.0000.000

ResidueLTQFDFWYCLHGCLM
Number767778798081828384858687888990
NetOGlycgscore0.0000.1600.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
iscore0.0000.0460.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000

ResidueNVVLLTQVVAGARIW
Number919293949596979899100101102103104105
NetOGlycgscore0.0000.0000.0000.0000.0000.1280.0000.0000.0000.0000.0000.0000.0000.0000.000
iscore0.0000.0000.0000.0000.0000.0840.0000.0000.0000.0000.0000.0000.0000.0000.000

ResidueRFPGKGHRKMNPWYL
Number106107108109110111112113114115116117118119120
NetOGlycgscore0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
iscore0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000

ResidueRILLASLAIFSLLTV
Number121122123124125126127128129130131132133134135
NetOGlycgscore0.0000.0000.0000.0000.0000.0770.0000.0000.0000.0000.0630.0000.0000.1020.000
iscore0.0000.0000.0000.0000.0000.0630.0000.0000.0000.0000.0530.0000.0000.0700.000

ResidueQFMYSNYWYDWHNSR
Number136137138139140141142143144145146147148149150
NetOGlycgscore0.0000.0000.0000.0000.0910.0000.0000.0000.0000.0000.0000.0000.0000.0720.000
iscore0.0000.0000.0000.0000.0360.0000.0000.0000.0000.0000.0000.0000.0000.0340.000

ResidueTLAYCNNLFLLKISM
Number151152153154155156157158159160161162163164165
NetOGlycgscore0.1130.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.1060.000
iscore0.0230.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0540.000

ResidueSLIKYIPQVTHNSTR
Number166167168169170171172173174175176177178179180
NetOGlycgscore0.0970.0000.0000.0000.0000.0000.0000.0000.0000.2400.0000.0000.2040.2750.000
iscore0.0900.0000.0000.0000.0000.0000.0000.0000.0000.0810.0000.0000.0200.0280.000

ResidueKSMDCFPIQGVFLDV
Number181182183184185186187188189190191192193194195
NetOGlycgscore0.0000.1810.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
iscore0.0000.0460.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000

ResidueTGGIASLLQLIWQLS
Number196197198199200201202203204205206207208209210
NetOGlycgscore0.1580.0000.0000.0000.0000.1240.0000.0000.0000.0000.0000.0000.0000.0000.127
iscore0.0840.0000.0000.0000.0000.0280.0000.0000.0000.0000.0000.0000.0000.0000.032

ResidueNDQGFSLDTFVTNFG
Number211212213214215216217218219220221222223224225
NetOGlycgscore0.0000.0000.0000.0000.0000.1170.0000.0000.1940.0000.0000.1820.0000.0000.000
iscore0.0000.0000.0000.0000.0000.0580.0000.0000.0490.0000.0000.0740.0000.0000.000

ResidueKVGLSMVTLIFNFIF
Number226227228229230231232233234235236237238239240
NetOGlycgscore0.0000.0000.0000.0000.0820.0000.0000.1160.0000.0000.0000.0000.0000.0000.000
iscore0.0000.0000.0000.0000.0660.0000.0000.0700.0000.0000.0000.0000.0000.0000.000

ResidueIMQWFVYRSRGHDLA
Number241242243244245246247248249250251252253254255
NetOGlycgscore0.0000.0000.0000.0000.0000.0000.0000.0000.1140.0000.0000.0000.0000.0000.000
iscore0.0000.0000.0000.0000.0000.0000.0000.0000.0770.0000.0000.0000.0000.0000.000

ResidueSEYPL
Number256257258259260
NetOGlycgscore0.2880.0000.0000.0000.000
iscore0.1080.0000.0000.0000.000

Threshold description :

G-scores greaterthan 0.5 are predicted as positive predictions. However for threonines an additional score is used: if the G-score is less than 0.5 but the I-score greater than 0.5 and there are no predicted neighbouring sites (distance less than 10 residues) the residue is also predicted as glycosylated.






Graphical Output :

annotation results graph






Analysis results from program: PsiPred

Running PsiPred Version 2.4

Function : Secondary Structure Prediction

PSIPRED Local Server

ResidueMVSLDDILGIVYVTS
Number123456789101112131415
PsiPredssscore905789999999999
sspredCCHHHHHHHHHHHHH

ResidueWSISMYPPIITNWRH
Number161718192021222324252627282930
PsiPredssscore999851056663010
sspredHHHHHHHHHHHHHCC

ResidueKSASAISMDFVMLNT
Number313233343536373839404142434445
PsiPredssscore000110089999999
sspredCCEEEEEHHHHHHHH

ResidueAGYSYLVISIFLQLY
Number464748495051525354555657585960
PsiPredssscore999999999999852
sspredHHHHHHHHHHHHHHH

ResidueCWKMTGDESDLGRPK
Number616263646566676869707172737475
PsiPredssscore045654320134553
sspredHHHHHHHHCCCCCCC

ResidueLTQFDFWYCLHGCLM
Number767778798081828384858687888990
PsiPredssscore048899999999999
sspredCHHHHHHHHHHHHHH

ResidueNVVLLTQVVAGARIW
Number919293949596979899100101102103104105
PsiPredssscore999999998720123
sspredHHHHHHHHHHHCCCC

ResidueRFPGKGHRKMNPWYL
Number106107108109110111112113114115116117118119120
PsiPredssscore569999988678999
sspredCCCCCCCCCCCHHHH

ResidueRILLASLAIFSLLTV
Number121122123124125126127128129130131132133134135
PsiPredssscore999988899888656
sspredHHHHHHHHHHHHHHH

ResidueQFMYSNYWYDWHNSR
Number136137138139140141142143144145146147148149150
PsiPredssscore553011000212322
sspredHHHEEEEECCCCCCH

ResidueTLAYCNNLFLLKISM
Number151152153154155156157158159160161162163164165
PsiPredssscore778999999999999
sspredHHHHHHHHHHHHHHH

ResidueSLIKYIPQVTHNSTR
Number166167168169170171172173174175176177178179180
PsiPredssscore999850053211123
sspredHHHHHHHHHHHCCCC

ResidueKSMDCFPIQGVFLDV
Number181182183184185186187188189190191192193194195
PsiPredssscore441104699999998
sspredCCCCHHHHHHHHHHH

ResidueTGGIASLLQLIWQLS
Number196197198199200201202203204205206207208209210
PsiPredssscore726999999998643
sspredHHHHHHHHHHHHHHH

ResidueNDQGFSLDTFVTNFG
Number211212213214215216217218219220221222223224225
PsiPredssscore112553333101158
sspredHCCCCCHHHHCCHHH

ResidueKVGLSMVTLIFNFIF
Number226227228229230231232233234235236237238239240
PsiPredssscore899999999999999
sspredHHHHHHHHHHHHHHH

ResidueIMQWFVYRSRGHDLA
Number241242243244245246247248249250251252253254255
PsiPredssscore999998833788720
sspredHHHHHHHHCCCCCCC

ResidueSEYPL
Number256257258259260
PsiPredssscore02699
sspredCCCCC

Threshold description :

No specific threshold exists. Instead a confidence level ranging from 0 to 9 is used for the predictions. Higher the value, higher is the confidence.






Graphical Output :

annotation results graph






Analysis results from program: DAS-TM filter

Running DAS-TM filter

Function : Transmembrane protein predictions

DAS-TMfilter Web Server

ResidueMVSLDDILGIVYVTS
Number123456789101112131415
DAS-TM filterScore0.2660.5310.7591.0091.2011.4991.8752.1932.4472.7002.8603.0013.1472.9472.755

ResidueWSISMYPPIITNWRH
Number161718192021222324252627282930
DAS-TM filterScore2.6252.4612.3572.1161.8711.6471.4451.2911.2301.1190.9420.7930.7070.6310.620

ResidueKSASAISMDFVMLNT
Number313233343536373839404142434445
DAS-TM filterScore0.6690.7880.9331.0861.2501.4101.4871.5871.7051.9392.1452.2642.3792.4022.565

ResidueAGYSYLVISIFLQLY
Number464748495051525354555657585960
DAS-TM filterScore2.6992.8983.1703.4393.7884.0514.1934.1714.0443.9523.7263.4443.0132.7082.323

ResidueCWKMTGDESDLGRPK
Number616263646566676869707172737475
DAS-TM filterScore1.9111.5201.1450.8970.6910.5340.4330.3730.3750.3870.4270.4270.4540.5020.568

ResidueLTQFDFWYCLHGCLM
Number767778798081828384858687888990
DAS-TM filterScore0.6760.7630.8621.0001.1201.3471.5551.8202.0702.2932.4452.6742.9503.2003.352

ResidueNVVLLTQVVAGARIW
Number919293949596979899100101102103104105
DAS-TM filterScore3.4283.6283.7443.6863.5403.2492.9712.8062.5862.2481.9091.6131.3721.2180.965

ResidueRFPGKGHRKMNPWYL
Number106107108109110111112113114115116117118119120
DAS-TM filterScore0.7510.6230.4940.4190.3560.3240.3370.3860.4790.6710.8641.1681.5781.9922.448

ResidueRILLASLAIFSLLTV
Number121122123124125126127128129130131132133134135
DAS-TM filterScore2.8833.4413.9594.3054.5534.8025.0755.1575.2055.0764.8184.6094.2483.8063.323

ResidueQFMYSNYWYDWHNSR
Number136137138139140141142143144145146147148149150
DAS-TM filterScore2.7992.4662.1131.7521.3851.1090.9270.7760.6460.5090.4620.4450.4710.5870.687

ResidueTLAYCNNLFLLKISM
Number151152153154155156157158159160161162163164165
DAS-TM filterScore0.8851.0871.2351.3791.5331.7261.9612.2762.5362.7032.7302.6492.6812.5682.470

ResidueSLIKYIPQVTHNSTR
Number166167168169170171172173174175176177178179180
DAS-TM filterScore2.3742.3022.1291.8681.6691.4311.1610.9630.8640.7410.6010.5070.4510.4150.389

ResidueKSMDCFPIQGVFLDV
Number181182183184185186187188189190191192193194195
DAS-TM filterScore0.4370.5260.6480.7550.9171.0751.2181.4081.5231.7392.0272.2012.3422.4132.572

ResidueTGGIASLLQLIWQLS
Number196197198199200201202203204205206207208209210
DAS-TM filterScore2.5992.6732.7602.8572.8342.7632.7332.5782.3132.1982.0041.7621.4911.3631.162

ResidueNDQGFSLDTFVTNFG
Number211212213214215216217218219220221222223224225
DAS-TM filterScore0.9710.8600.8560.9161.0171.0831.1991.2261.3361.4871.5771.6191.7171.9352.042

ResidueKVGLSMVTLIFNFIF
Number226227228229230231232233234235236237238239240
DAS-TM filterScore2.2012.5312.8153.2333.5593.9144.2094.4244.7134.8994.8964.7364.7014.5414.184

ResidueIMQWFVYRSRGHDLA
Number241242243244245246247248249250251252253254255
DAS-TM filterScore3.7713.2532.7752.4322.1081.7751.3861.0490.8130.6340.4880.3890.3260.2910.247

ResidueSEYPL
Number256257258259260
DAS-TM filterScore0.201