www.bioinf.org.uk : Dr. Andrew C.R. Martin's Group
Download the complete mapping from the PDB to UniProt entries:
16.02.11: Note the files are now supplied gzipped as the uncompressed residue level mapping had now reached 1.7G (gzipped it is <15% of that size).
Columns in the chain mapping are:
Columns in the residue mapping are:
You may also access the mapping directly from your scripts. [Instructions]
You may download a draft manuscript now
published in Bioinformatics. If you use PDBSWS, please cite the
Martin, Andrew C. R. (2005) Mapping PDB chains to UniProtKB entries, Bioinformatics, 21:4297-4301
The data were last updated on
22 Mar 2017 (Corrected download dataset from 27 Nov 2016 - queryable data unchanged)
The residue mapping download file was missing some entries. This resulted from some software not running properly on a new server.