Software
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| Bioinformatics Software | |
|---|---|
| ProFit | Protein least-squares fitting |
| QTree | Space filling pictures using the quad-tree algorithm |
| MINT | A graphical interface to Andrej Sali's Modeller program |
| NW | A pairwise Needleman and Wunsch sequence alignment program |
| Torsions | Calculates backbone torsion angles from a PDB file |
| AVP | Calculates protein void volumes and packing quality |
| APAT | 'Automated Protein Annotation Tool' |
| SAPTF | 'Sequence Analysis Plugin Tool Framework' |
| JavaScript | |
| buttons.js | Handle buttons on a navigation bar (just click to download) |
| lastmodified.js | Print 'last modified' text (just click to download) |
| Utilities | |
| QLite | A batch queueing system for farms of machines |
| Cluster | A program to perform hierarchical cluster analysis on a set of arbitrary vectors |
| CDoc | A program to generate HTML documentation from C source files |
| Odds and ends | |
| Mirror | A patch for the popular 'mirror' program |
| Wdiff | A patch for the GNU 'wdiff' program to fix a bug under Linux |
Availability
Our web site will be unavailable from 5.30-6.30pm on 23rd June 2010 for server maintenance.
16 October 2009
Apologies for the problems with Abysis over the last few days. This was the result of a sudden power outage on Wednesday affecting one of our machines.
11 December 2009: SAPTF
SAPTF is a new system for the easy creation of sequence analysis web sites.
