Software

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Bioinformatics Software
ProFit Protein least-squares fitting
QTree Space filling pictures using the quad-tree algorithm
MINT A graphical interface to Andrej Sali's Modeller program
NW A pairwise Needleman and Wunsch sequence alignment program
Torsions Calculates backbone torsion angles from a PDB file
AVP Calculates protein void volumes and packing quality
APAT 'Automated Protein Annotation Tool'
SAPTF 'Sequence Analysis Plugin Tool Framework'
Prodoric A command-line wrapper to the PRODORIC web site
BiopTools A set of command-line tools for handling (primarily) protein structure - NEW!
JavaScript
JSAV JavaScript sequence alignment viewer - NEW!
buttons.js Handle buttons on a navigation bar (just click to download)
lastmodified.js Print 'last modified' text (just click to download)
Utilities
QLite A batch queueing system for farms of machines
Cluster A program to perform hierarchical cluster analysis on a set of arbitrary vectors
CDoc A program to generate HTML documentation from C source files
Odds and ends
Mirror A patch for the popular 'mirror' program
Wdiff A patch for the GNU 'wdiff' program to fix a bug under Linux
Programming libraries
BiopLib A library of C routines for general programming and handling protein structure

Availability

17.12.15 Warning! Our servers will be unavailable on 5th January 2016 during scheduled work on the power system in the building.

17 November 2015

BBSRC LIDo CASE Studentship with UCB Celltech available. See the Jobs / PhDs page.

29 June 2015

BiopLib V3.3 and BiopTools V1.2 released.