Table of results for automatic protein check

Results for modeling_eg_1.pdb

List results for one check

Results for check BMPCHK by WHAT IF

Values by residue

The contact distances of all atom pairs have been checked. Two atoms are said to `bump' if they are closer than the sum of their Van der Waals radii minus 0.40 Angstrom. For hydrogen bonded pairs a tolerance of 0.55 Angstrom is used. To get a per-residue score all bumps made by the atoms in the residue are added together. A really good structure does not have any non-zero values in this table.

Values are considered poor if they are larger than 0.00.

Values are considered bad if they are larger than 0.10.

residue BMPCHK
14-TRP0.16
18-THR0.05
22-ASP0.03
25-LYS0.03
27-ALA0.03
28-GLY0.30
29-ILE0.08
30-ASN0.24
31-LEU0.20
32-VAL0.21
33-LEU0.15
34-TRP0.64
35-MET1.29
36-PHE1.55
38-ASN0.64
39-VAL0.39
41-ASN0.08
42-MET1.89
43-ARG0.06
44-ALA0.01
45-GLN0.50
46-PHE0.41
49-PHE1.11
50-ASN0.01
52-ASN0.24
64-PHE0.92
65-ILE0.12
67-GLN0.02
68-VAL0.47
71-ILE0.13
72-VAL0.11
78-LEU0.18
79-LEU0.11
84-ASN0.25
87-GLN0.25
97-LYS0.19
99-HIS0.19
100-VAL0.01
101-ASN0.01
104-ILE0.67
107-GLU0.20
108-PHE0.09
109-PHE0.17
111-PRO0.21
112-LEU0.39
113-GLN0.13
119-PHE0.45
120-ILE0.11
121-GLU0.07
129-GLY0.12
131-ASP0.03
133-PRO0.09
136-TRP0.05
137-GLY0.04
139-LEU0.25
140-ILE0.12
143-PHE0.49
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